Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Dnajc28Q8VCE1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dnajc28Q8VCE1 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Dnajc28Q8VCE1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Dnajc28Q8VCE1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Gm2559-201ENSMUST00000201323 363 ntBASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dnajc28Q8VCE1 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dnajc28Q8VCE1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Mir6982-201ENSMUST00000184354 68 ntBASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dnajc28Q8VCE1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dnajc28Q8VCE1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Dnajc28Q8VCE1 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Dnajc28Q8VCE1 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Dnajc28Q8VCE1 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Dnajc28Q8VCE1 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Dnajc28Q8VCE1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Dnajc28Q8VCE1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Dnajc28Q8VCE1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Dnajc28Q8VCE1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Dnajc28Q8VCE1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.01■□□□□ 0.79
Dnajc28Q8VCE1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms