Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf8Q8VC56 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf8Q8VC56 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.77■□□□□ 0.43
Rnf8Q8VC56 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf8Q8VC56 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.76■□□□□ 0.43
Rnf8Q8VC56 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Gm5874-201ENSMUST00000096101 508 ntBASIC17.76■□□□□ 0.43
Rnf8Q8VC56 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf8Q8VC56 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rnf8Q8VC56 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rnf8Q8VC56 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Rnf8Q8VC56 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rnf8Q8VC56 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.71■□□□□ 0.43
Rnf8Q8VC56 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.71■□□□□ 0.43
Rnf8Q8VC56 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rnf8Q8VC56 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf8Q8VC56 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rnf8Q8VC56 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rnf8Q8VC56 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms