Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.02■□□□□ 0.16
Vmn1r228Q8R2A7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vmn1r228Q8R2A7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vmn1r228Q8R2A7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vmn1r228Q8R2A7 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.02■□□□□ 0.15
Vmn1r228Q8R2A7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Vmn1r228Q8R2A7 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Vmn1r228Q8R2A7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.02■□□□□ 0.15
Vmn1r228Q8R2A7 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.01■□□□□ 0.15
Vmn1r228Q8R2A7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16■□□□□ 0.15
Vmn1r228Q8R2A7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vmn1r228Q8R2A7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vmn1r228Q8R2A7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.97■□□□□ 0.15
Vmn1r228Q8R2A7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms