Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rpp40Q8R1F9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rpp40Q8R1F9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Gm27011-201ENSMUST00000182352 972 ntBASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.82■□□□□ 0.76
Rpp40Q8R1F9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Gm20049-201ENSMUST00000219950 730 ntBASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rpp40Q8R1F9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Gm44549-201ENSMUST00000208351 577 ntBASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.8■□□□□ 0.76
Rpp40Q8R1F9 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rpp40Q8R1F9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Gm10653-202ENSMUST00000139570 835 ntBASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rpp40Q8R1F9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.77■□□□□ 0.76
Rpp40Q8R1F9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp40Q8R1F9 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp40Q8R1F9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Rpp40Q8R1F9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.77■□□□□ 0.76
Rpp40Q8R1F9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.77■□□□□ 0.76
Rpp40Q8R1F9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rpp40Q8R1F9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Rpp40Q8R1F9 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Rpp40Q8R1F9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms