Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shtn1Q8K2Q9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Shtn1Q8K2Q9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shtn1Q8K2Q9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Shtn1Q8K2Q9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Flg-201ENSMUST00000050758 1488 ntBASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Shtn1Q8K2Q9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Gm30025-201ENSMUST00000218555 728 ntBASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Shtn1Q8K2Q9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Gm21814-202ENSMUST00000203277 873 ntBASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Shtn1Q8K2Q9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 Gm11539-201ENSMUST00000119837 557 ntBASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 Gm13436-201ENSMUST00000120418 567 ntBASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Shtn1Q8K2Q9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.07
Shtn1Q8K2Q9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Shtn1Q8K2Q9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Gm13559-201ENSMUST00000120476 863 ntBASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Shtn1Q8K2Q9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Shtn1Q8K2Q9 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Shtn1Q8K2Q9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Shtn1Q8K2Q9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Shtn1Q8K2Q9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms