Protein–RNA interactions for Protein: Q8K194

Snrnp27, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp27Q8K194 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp27Q8K194 Gm12527-201ENSMUST00000117967 564 ntBASIC18.27■□□□□ 0.52
Snrnp27Q8K194 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.27■□□□□ 0.52
Snrnp27Q8K194 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp27Q8K194 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snrnp27Q8K194 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Snrnp27Q8K194 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Snrnp27Q8K194 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Snrnp27Q8K194 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Snrnp27Q8K194 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Snrnp27Q8K194 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Snrnp27Q8K194 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.25■□□□□ 0.51
Snrnp27Q8K194 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Gm27801-201ENSMUST00000184174 223 ntBASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Snrnp27Q8K194 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Snrnp27Q8K194 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Snrnp27Q8K194 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.21■□□□□ 0.51
Snrnp27Q8K194 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms