Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.06■□□□□ 0.64
Hmgcll1Q8JZS7 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Hmgcll1Q8JZS7 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hmgcll1Q8JZS7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hmgcll1Q8JZS7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Gm5643-201ENSMUST00000117081 966 ntBASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Hmgcll1Q8JZS7 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Hmgcll1Q8JZS7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hmgcll1Q8JZS7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19■□□□□ 0.63
Hmgcll1Q8JZS7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms