Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21■□□□□ 0.95
Syne4Q8CII8 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Syne4Q8CII8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Syne4Q8CII8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Gm37292-201ENSMUST00000192062 758 ntBASIC20.99■□□□□ 0.95
Syne4Q8CII8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Syne4Q8CII8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syne4Q8CII8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syne4Q8CII8 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC20.98■□□□□ 0.95
Syne4Q8CII8 Odf3b-204ENSMUST00000227834 930 ntBASIC20.98■□□□□ 0.95
Syne4Q8CII8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syne4Q8CII8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Syne4Q8CII8 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Syne4Q8CII8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Syne4Q8CII8 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.98■□□□□ 0.95
Syne4Q8CII8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Gm7889-201ENSMUST00000185591 958 ntBASIC20.97■□□□□ 0.95
Syne4Q8CII8 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.97■□□□□ 0.95
Syne4Q8CII8 Gm7367-201ENSMUST00000057611 492 ntBASIC20.97■□□□□ 0.95
Syne4Q8CII8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Syne4Q8CII8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Gm6659-201ENSMUST00000174752 547 ntBASIC20.96■□□□□ 0.95
Syne4Q8CII8 Timm23-208ENSMUST00000226683 750 ntBASIC20.96■□□□□ 0.95
Syne4Q8CII8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Syne4Q8CII8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
Syne4Q8CII8 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
Syne4Q8CII8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.94■□□□□ 0.94
Syne4Q8CII8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Syne4Q8CII8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Syne4Q8CII8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Gm3375-201ENSMUST00000203929 796 ntBASIC20.93■□□□□ 0.94
Syne4Q8CII8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Syne4Q8CII8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms