Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Gm27801-201ENSMUST00000184174 223 ntBASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Gm40848-201ENSMUST00000221998 324 ntBASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ckap4Q8BMK4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ckap4Q8BMK4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
Ckap4Q8BMK4 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Gm43060-201ENSMUST00000200621 289 ntBASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ckap4Q8BMK4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ckap4Q8BMK4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ckap4Q8BMK4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ckap4Q8BMK4 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms