Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Cdhr3Q8BL00 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Cdhr3Q8BL00 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Cdhr3Q8BL00 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cdhr3Q8BL00 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdhr3Q8BL00 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cdhr3Q8BL00 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Gm38205-201ENSMUST00000192243 258 ntBASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Cdhr3Q8BL00 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Gm40848-201ENSMUST00000221998 324 ntBASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Cdhr3Q8BL00 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdhr3Q8BL00 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cdhr3Q8BL00 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cdhr3Q8BL00 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdhr3Q8BL00 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.06■□□□□ 0.16
Cdhr3Q8BL00 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cdhr3Q8BL00 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms