Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Usp1Q8BJQ2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Usp1Q8BJQ2 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Gm2399-201ENSMUST00000104944 225 ntBASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Usp1Q8BJQ2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Usp1Q8BJQ2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.54■□□□□ 0.72
Usp1Q8BJQ2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Usp1Q8BJQ2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Gm15378-201ENSMUST00000121894 207 ntBASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Gm13158-201ENSMUST00000122007 736 ntBASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Usp1Q8BJQ2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp1Q8BJQ2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Usp1Q8BJQ2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Usp1Q8BJQ2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Gm10698-201ENSMUST00000182663 604 ntBASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Usp1Q8BJQ2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms