Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim6Q8BGE7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Trim6Q8BGE7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim6Q8BGE7 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim6Q8BGE7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Trim6Q8BGE7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim6Q8BGE7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.57■□□□□ 0.72
Trim6Q8BGE7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim6Q8BGE7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim6Q8BGE7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.56■□□□□ 0.72
Trim6Q8BGE7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim6Q8BGE7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.54■□□□□ 0.72
Trim6Q8BGE7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim6Q8BGE7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Gm12251-201ENSMUST00000117893 792 ntBASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim6Q8BGE7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim6Q8BGE7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms