Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Atpaf1Q811I0 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Atpaf1Q811I0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.09■□□□□ 0.01
Atpaf1Q811I0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Atpaf1Q811I0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atpaf1Q811I0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.08■□□□□ 0.01
Atpaf1Q811I0 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.08■□□□□ 0.01
Atpaf1Q811I0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Atpaf1Q811I0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Atpaf1Q811I0 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.08■□□□□ 0
Atpaf1Q811I0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.08■□□□□ 0
Atpaf1Q811I0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Atpaf1Q811I0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.07■□□□□ 0
Atpaf1Q811I0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC15.07■□□□□ 0
Atpaf1Q811I0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.07■□□□□ 0
Atpaf1Q811I0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC15.07■□□□□ 0
Atpaf1Q811I0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Atpaf1Q811I0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atpaf1Q811I0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atpaf1Q811I0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atpaf1Q811I0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Atpaf1Q811I0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC15.06■□□□□ 0
Atpaf1Q811I0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atpaf1Q811I0 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atpaf1Q811I0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.06■□□□□ 0
Atpaf1Q811I0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Atpaf1Q811I0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.06■□□□□ 0
Atpaf1Q811I0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Atpaf1Q811I0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms