Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otop1Q80VM9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Otop1Q80VM9 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.69■□□□□ 0.42
Otop1Q80VM9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Otop1Q80VM9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otop1Q80VM9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otop1Q80VM9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.69■□□□□ 0.42
Otop1Q80VM9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.69■□□□□ 0.42
Otop1Q80VM9 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.69■□□□□ 0.42
Otop1Q80VM9 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otop1Q80VM9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Otop1Q80VM9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.68■□□□□ 0.42
Otop1Q80VM9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otop1Q80VM9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Otop1Q80VM9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.66■□□□□ 0.42
Otop1Q80VM9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Otop1Q80VM9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Mir5122-201ENSMUST00000175004 89 ntBASIC17.65■□□□□ 0.42
Otop1Q80VM9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otop1Q80VM9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Otop1Q80VM9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Otop1Q80VM9 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.64■□□□□ 0.41
Otop1Q80VM9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Otop1Q80VM9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms