Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Gm13168-201ENSMUST00000121771 632 ntBASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Gm44549-201ENSMUST00000208351 577 ntBASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdh19Q80TF3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Gm12896-201ENSMUST00000118430 226 ntBASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh19Q80TF3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh19Q80TF3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdh19Q80TF3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdh19Q80TF3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdh19Q80TF3 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh19Q80TF3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdh19Q80TF3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcdh19Q80TF3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Gm27275-201ENSMUST00000184318 272 ntBASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdh19Q80TF3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdh19Q80TF3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdh19Q80TF3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms