Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3d21Q7TSG5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Gm26571-201ENSMUST00000181399 666 ntBASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3d21Q7TSG5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Nespas-201ENSMUST00000143738 1083 ntBASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Gm6420-201ENSMUST00000193885 723 ntBASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Sh3d21Q7TSG5 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Sh3d21Q7TSG5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3d21Q7TSG5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3d21Q7TSG5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3d21Q7TSG5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms