Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rfx4Q7TNK1 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rfx4Q7TNK1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx4Q7TNK1 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx4Q7TNK1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx4Q7TNK1 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx4Q7TNK1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rfx4Q7TNK1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rfx4Q7TNK1 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rfx4Q7TNK1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rfx4Q7TNK1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.69■□□□□ 0.42
Rfx4Q7TNK1 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Gm8969-201ENSMUST00000199694 526 ntBASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rfx4Q7TNK1 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Gm9959-201ENSMUST00000068277 390 ntBASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rfx4Q7TNK1 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rfx4Q7TNK1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rfx4Q7TNK1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms