Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.69■□□□□ 0.58
Sox11Q7M6Y2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox11Q7M6Y2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.69■□□□□ 0.58
Sox11Q7M6Y2 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox11Q7M6Y2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox11Q7M6Y2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.69■□□□□ 0.58
Sox11Q7M6Y2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sox11Q7M6Y2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Gm2399-201ENSMUST00000104944 225 ntBASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Gm13158-201ENSMUST00000122007 736 ntBASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sox11Q7M6Y2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sox11Q7M6Y2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sox11Q7M6Y2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sox11Q7M6Y2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox11Q7M6Y2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Sox11Q7M6Y2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Sox11Q7M6Y2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sox11Q7M6Y2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Sox11Q7M6Y2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Sox11Q7M6Y2 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms