Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a1Q6PEM8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.19■□□□□ 0.18
Slc46a1Q6PEM8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Gm27275-201ENSMUST00000184318 272 ntBASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc46a1Q6PEM8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 Gm12896-201ENSMUST00000118430 226 ntBASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Slc46a1Q6PEM8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc46a1Q6PEM8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc46a1Q6PEM8 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc46a1Q6PEM8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a1Q6PEM8 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Slc46a1Q6PEM8 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a1Q6PEM8 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a1Q6PEM8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a1Q6PEM8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc46a1Q6PEM8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms