Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.67■□□□□ 0.42
Sdc3Q64519 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Sdc3Q64519 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Sdc3Q64519 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.67■□□□□ 0.42
Sdc3Q64519 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Rarb-207ENSMUST00000225921 2756 ntBASIC17.67■□□□□ 0.42
Sdc3Q64519 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.67■□□□□ 0.42
Sdc3Q64519 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Sdc3Q64519 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Sdc3Q64519 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Sdc3Q64519 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Sdc3Q64519 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Sdc3Q64519 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.65■□□□□ 0.42
Sdc3Q64519 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.65■□□□□ 0.42
Sdc3Q64519 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.65■□□□□ 0.42
Sdc3Q64519 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Sdc3Q64519 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sdc3Q64519 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Sdc3Q64519 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sdc3Q64519 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc3Q64519 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc3Q64519 Gm10653-202ENSMUST00000139570 835 ntBASIC17.64■□□□□ 0.41
Sdc3Q64519 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.64■□□□□ 0.41
Sdc3Q64519 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc3Q64519 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.64■□□□□ 0.41
Sdc3Q64519 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.64■□□□□ 0.41
Sdc3Q64519 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Sdc3Q64519 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc3Q64519 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Sdc3Q64519 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc3Q64519 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc3Q64519 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sdc3Q64519 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Sdc3Q64519 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sdc3Q64519 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Sdc3Q64519 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Sdc3Q64519 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.62■□□□□ 0.41
Sdc3Q64519 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Sdc3Q64519 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.62■□□□□ 0.41
Sdc3Q64519 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.62■□□□□ 0.41
Sdc3Q64519 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sdc3Q64519 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.61■□□□□ 0.41
Sdc3Q64519 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Sdc3Q64519 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sdc3Q64519 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms