Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Six1Q62231 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Gm13534-201ENSMUST00000121169 513 ntBASIC19■□□□□ 0.63
Six1Q62231 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Six1Q62231 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19■□□□□ 0.63
Six1Q62231 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Six1Q62231 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Six1Q62231 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.99■□□□□ 0.63
Six1Q62231 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.99■□□□□ 0.63
Six1Q62231 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Six1Q62231 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.99■□□□□ 0.63
Six1Q62231 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Six1Q62231 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Six1Q62231 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Six1Q62231 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Six1Q62231 Reep4-203ENSMUST00000226563 1444 ntBASIC18.98■□□□□ 0.63
Six1Q62231 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Six1Q62231 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Six1Q62231 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.97■□□□□ 0.63
Six1Q62231 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Six1Q62231 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.97■□□□□ 0.63
Six1Q62231 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Six1Q62231 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.96■□□□□ 0.63
Six1Q62231 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Six1Q62231 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Six1Q62231 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Six1Q62231 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.94■□□□□ 0.62
Six1Q62231 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Six1Q62231 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.94■□□□□ 0.62
Six1Q62231 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.94■□□□□ 0.62
Six1Q62231 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Six1Q62231 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.94■□□□□ 0.62
Six1Q62231 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Six1Q62231 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Six1Q62231 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Six1Q62231 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six1Q62231 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.93■□□□□ 0.62
Six1Q62231 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Six1Q62231 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.93■□□□□ 0.62
Six1Q62231 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six1Q62231 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Six1Q62231 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Six1Q62231 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Six1Q62231 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms