Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.46■□□□□ 0.71
Trim21Q62191 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim21Q62191 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trim21Q62191 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trim21Q62191 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.46■□□□□ 0.71
Trim21Q62191 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim21Q62191 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Trim21Q62191 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.45■□□□□ 0.7
Trim21Q62191 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.45■□□□□ 0.7
Trim21Q62191 Gm9988-201ENSMUST00000069786 435 ntBASIC19.45■□□□□ 0.7
Trim21Q62191 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Trim21Q62191 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.45■□□□□ 0.7
Trim21Q62191 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trim21Q62191 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trim21Q62191 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim21Q62191 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.44■□□□□ 0.7
Trim21Q62191 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim21Q62191 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trim21Q62191 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.44■□□□□ 0.7
Trim21Q62191 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trim21Q62191 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trim21Q62191 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trim21Q62191 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Trim21Q62191 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Trim21Q62191 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trim21Q62191 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.43■□□□□ 0.7
Trim21Q62191 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trim21Q62191 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim21Q62191 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim21Q62191 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim21Q62191 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim21Q62191 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim21Q62191 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.42■□□□□ 0.7
Trim21Q62191 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.42■□□□□ 0.7
Trim21Q62191 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.42■□□□□ 0.7
Trim21Q62191 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim21Q62191 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim21Q62191 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trim21Q62191 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.42■□□□□ 0.7
Trim21Q62191 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Trim21Q62191 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trim21Q62191 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Trim21Q62191 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trim21Q62191 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.41■□□□□ 0.7
Trim21Q62191 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trim21Q62191 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.4■□□□□ 0.7
Trim21Q62191 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.4■□□□□ 0.7
Trim21Q62191 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms