Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six4Q61321 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Six4Q61321 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Six4Q61321 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Six4Q61321 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.68■□□□□ 0.58
Six4Q61321 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Six4Q61321 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Six4Q61321 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Six4Q61321 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Six4Q61321 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.67■□□□□ 0.58
Six4Q61321 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Six4Q61321 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.67■□□□□ 0.58
Six4Q61321 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Six4Q61321 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Six4Q61321 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.66■□□□□ 0.58
Six4Q61321 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Six4Q61321 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Six4Q61321 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Six4Q61321 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six4Q61321 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six4Q61321 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Six4Q61321 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six4Q61321 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Six4Q61321 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Six4Q61321 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Six4Q61321 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Six4Q61321 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six4Q61321 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Six4Q61321 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six4Q61321 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Six4Q61321 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Six4Q61321 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Six4Q61321 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Six4Q61321 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Six4Q61321 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Six4Q61321 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Six4Q61321 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six4Q61321 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.64■□□□□ 0.57
Six4Q61321 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six4Q61321 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Six4Q61321 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six4Q61321 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Six4Q61321 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
Six4Q61321 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Six4Q61321 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Six4Q61321 Gm29257-201ENSMUST00000186115 639 ntBASIC18.63■□□□□ 0.57
Six4Q61321 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.63■□□□□ 0.57
Six4Q61321 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Gm10602-201ENSMUST00000098239 609 ntBASIC18.63■□□□□ 0.57
Six4Q61321 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Six4Q61321 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Six4Q61321 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Six4Q61321 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Gm26524-201ENSMUST00000192339 390 ntBASIC18.62■□□□□ 0.57
Six4Q61321 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Six4Q61321 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.62■□□□□ 0.57
Six4Q61321 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Six4Q61321 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Six4Q61321 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Six4Q61321 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six4Q61321 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six4Q61321 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Six4Q61321 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Six4Q61321 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.61■□□□□ 0.57
Six4Q61321 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six4Q61321 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six4Q61321 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six4Q61321 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Six4Q61321 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.61■□□□□ 0.57
Six4Q61321 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms