Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.75■□□□□ 0.59
Sdf4Q61112 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.75■□□□□ 0.59
Sdf4Q61112 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sdf4Q61112 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sdf4Q61112 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.74■□□□□ 0.59
Sdf4Q61112 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sdf4Q61112 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdf4Q61112 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Sdf4Q61112 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Sdf4Q61112 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.74■□□□□ 0.59
Sdf4Q61112 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sdf4Q61112 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.74■□□□□ 0.59
Sdf4Q61112 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.74■□□□□ 0.59
Sdf4Q61112 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sdf4Q61112 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdf4Q61112 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Sdf4Q61112 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdf4Q61112 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sdf4Q61112 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.73■□□□□ 0.59
Sdf4Q61112 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.73■□□□□ 0.59
Sdf4Q61112 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdf4Q61112 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdf4Q61112 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sdf4Q61112 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.72■□□□□ 0.59
Sdf4Q61112 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Gm27405-201ENSMUST00000184201 112 ntBASIC18.72■□□□□ 0.59
Sdf4Q61112 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sdf4Q61112 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.72■□□□□ 0.59
Sdf4Q61112 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.72■□□□□ 0.59
Sdf4Q61112 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Sdf4Q61112 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.72■□□□□ 0.59
Sdf4Q61112 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sdf4Q61112 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdf4Q61112 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdf4Q61112 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdf4Q61112 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdf4Q61112 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdf4Q61112 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sdf4Q61112 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.71■□□□□ 0.59
Sdf4Q61112 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sdf4Q61112 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdf4Q61112 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.7■□□□□ 0.58
Sdf4Q61112 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Sdf4Q61112 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Sdf4Q61112 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdf4Q61112 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sdf4Q61112 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdf4Q61112 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.69■□□□□ 0.58
Sdf4Q61112 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sdf4Q61112 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sdf4Q61112 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdf4Q61112 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
Sdf4Q61112 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Sdf4Q61112 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdf4Q61112 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sdf4Q61112 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdf4Q61112 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdf4Q61112 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms