Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav8d-1Q5R1H8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trav8d-1Q5R1H8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav8d-1Q5R1H8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
Trav8d-1Q5R1H8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Gm45417-201ENSMUST00000209533 758 ntBASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav8d-1Q5R1H8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav8d-1Q5R1H8 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Gm15039-201ENSMUST00000118914 875 ntBASIC15.06■□□□□ 0
Trav8d-1Q5R1H8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms