Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Gm38027-201ENSMUST00000192315 235 ntBASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Gm21559-201ENSMUST00000220638 855 ntBASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Spg11Q3UHA3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Spg11Q3UHA3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.11■□□□□ 0.33
Spg11Q3UHA3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Spg11Q3UHA3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Gm18733-201ENSMUST00000173950 856 ntBASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Spg11Q3UHA3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Gm28659-201ENSMUST00000188013 759 ntBASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Spg11Q3UHA3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Spg11Q3UHA3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Spg11Q3UHA3 Gm27357-201ENSMUST00000183754 135 ntBASIC17.08■□□□□ 0.33
Spg11Q3UHA3 Gm38285-201ENSMUST00000192928 922 ntBASIC17.08■□□□□ 0.33
Spg11Q3UHA3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.08■□□□□ 0.33
Spg11Q3UHA3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Spg11Q3UHA3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Gm18206-201ENSMUST00000207027 926 ntBASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Spg11Q3UHA3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Spg11Q3UHA3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms