Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shcbp1lQ3TTP0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shcbp1lQ3TTP0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shcbp1lQ3TTP0 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Gm8520-201ENSMUST00000186517 868 ntBASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Shcbp1lQ3TTP0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Shcbp1lQ3TTP0 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Shcbp1lQ3TTP0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shcbp1lQ3TTP0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shcbp1lQ3TTP0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Shcbp1lQ3TTP0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Shcbp1lQ3TTP0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms