Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Gm20049-201ENSMUST00000219950 730 ntBASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Khdc4Q3TCX3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Khdc4Q3TCX3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Khdc4Q3TCX3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc4Q3TCX3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Khdc4Q3TCX3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Khdc4Q3TCX3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Gm13168-201ENSMUST00000121771 632 ntBASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Khdc4Q3TCX3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Khdc4Q3TCX3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Khdc4Q3TCX3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.47■□□□□ 0.39
Khdc4Q3TCX3 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms