Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Treml4Q3LRV9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
Treml4Q3LRV9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Treml4Q3LRV9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Mir1199-201ENSMUST00000117015 119 ntBASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Gm11249-201ENSMUST00000117071 859 ntBASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Treml4Q3LRV9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Treml4Q3LRV9 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml4Q3LRV9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml4Q3LRV9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml4Q3LRV9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Treml4Q3LRV9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.26■□□□□ 0.35
Treml4Q3LRV9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Treml4Q3LRV9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Treml4Q3LRV9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml4Q3LRV9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Treml4Q3LRV9 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.25■□□□□ 0.35
Treml4Q3LRV9 Gm10698-201ENSMUST00000182663 604 ntBASIC17.25■□□□□ 0.35
Treml4Q3LRV9 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.25■□□□□ 0.35
Treml4Q3LRV9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Treml4Q3LRV9 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms