Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Nespas-201ENSMUST00000143738 1083 ntBASIC18.39■□□□□ 0.53
Ldb1P70662 Gm26571-201ENSMUST00000181399 666 ntBASIC18.39■□□□□ 0.53
Ldb1P70662 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Ldb1P70662 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.39■□□□□ 0.53
Ldb1P70662 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Ldb1P70662 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ldb1P70662 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ldb1P70662 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.38■□□□□ 0.53
Ldb1P70662 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 Gm7514-201ENSMUST00000209475 934 ntBASIC18.38■□□□□ 0.53
Ldb1P70662 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.38■□□□□ 0.53
Ldb1P70662 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ldb1P70662 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb1P70662 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Ldb1P70662 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.37■□□□□ 0.53
Ldb1P70662 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.37■□□□□ 0.53
Ldb1P70662 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb1P70662 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb1P70662 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ldb1P70662 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 AV356131-201ENSMUST00000206201 750 ntBASIC18.36■□□□□ 0.53
Ldb1P70662 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.36■□□□□ 0.53
Ldb1P70662 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ldb1P70662 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb1P70662 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb1P70662 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.35■□□□□ 0.53
Ldb1P70662 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb1P70662 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.35■□□□□ 0.53
Ldb1P70662 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.35■□□□□ 0.53
Ldb1P70662 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Ldb1P70662 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb1P70662 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb1P70662 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ldb1P70662 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Ldb1P70662 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb1P70662 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.34■□□□□ 0.53
Ldb1P70662 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb1P70662 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.34■□□□□ 0.53
Ldb1P70662 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.34■□□□□ 0.53
Ldb1P70662 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.34■□□□□ 0.53
Ldb1P70662 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb1P70662 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb1P70662 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb1P70662 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Ldb1P70662 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.34■□□□□ 0.53
Ldb1P70662 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ldb1P70662 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb1P70662 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb1P70662 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb1P70662 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.33■□□□□ 0.53
Ldb1P70662 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb1P70662 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ldb1P70662 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb1P70662 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ldb1P70662 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.32■□□□□ 0.52
Ldb1P70662 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.32■□□□□ 0.52
Ldb1P70662 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ldb1P70662 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ldb1P70662 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb1P70662 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb1P70662 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb1P70662 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Ldb1P70662 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Ldb1P70662 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb1P70662 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb1P70662 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ldb1P70662 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms