Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.82■□□□□ 0.28
Cdh11P55288 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cdh11P55288 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh11P55288 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh11P55288 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh11P55288 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.81■□□□□ 0.28
Cdh11P55288 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Cdh11P55288 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.81■□□□□ 0.28
Cdh11P55288 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh11P55288 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh11P55288 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cdh11P55288 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Cdh11P55288 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh11P55288 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh11P55288 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cdh11P55288 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.8■□□□□ 0.28
Cdh11P55288 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh11P55288 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdh11P55288 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh11P55288 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.8■□□□□ 0.28
Cdh11P55288 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cdh11P55288 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cdh11P55288 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.79■□□□□ 0.28
Cdh11P55288 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.79■□□□□ 0.28
Cdh11P55288 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Gm26571-201ENSMUST00000181399 666 ntBASIC16.79■□□□□ 0.28
Cdh11P55288 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Gm42778-201ENSMUST00000199644 553 ntBASIC16.79■□□□□ 0.28
Cdh11P55288 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdh11P55288 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Gm7291-201ENSMUST00000199147 382 ntBASIC16.78■□□□□ 0.28
Cdh11P55288 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdh11P55288 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cdh11P55288 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Cdh11P55288 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.77■□□□□ 0.28
Cdh11P55288 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.77■□□□□ 0.28
Cdh11P55288 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdh11P55288 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh11P55288 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.77■□□□□ 0.27
Cdh11P55288 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh11P55288 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.77■□□□□ 0.27
Cdh11P55288 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdh11P55288 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cdh11P55288 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.76■□□□□ 0.27
Cdh11P55288 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdh11P55288 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdh11P55288 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdh11P55288 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdh11P55288 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdh11P55288 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.75■□□□□ 0.27
Cdh11P55288 Gm27405-201ENSMUST00000184201 112 ntBASIC16.75■□□□□ 0.27
Cdh11P55288 Gm9988-201ENSMUST00000069786 435 ntBASIC16.75■□□□□ 0.27
Cdh11P55288 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdh11P55288 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdh11P55288 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Cdh11P55288 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms