Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcs2P54869 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcs2P54869 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcs2P54869 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Hmgcs2P54869 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.65■□□□□ 0.9
Hmgcs2P54869 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.64■□□□□ 0.9
Hmgcs2P54869 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Hmgcs2P54869 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
Hmgcs2P54869 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Gm43183-201ENSMUST00000200632 547 ntBASIC20.63■□□□□ 0.89
Hmgcs2P54869 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Hmgcs2P54869 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Golph3-202ENSMUST00000226517 2359 ntBASIC20.62■□□□□ 0.89
Hmgcs2P54869 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Hmgcs2P54869 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Hmgcs2P54869 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.61■□□□□ 0.89
Hmgcs2P54869 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Hmgcs2P54869 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Gm10138-203ENSMUST00000206952 366 ntBASIC20.6■□□□□ 0.89
Hmgcs2P54869 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Hmgcs2P54869 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Gm43799-201ENSMUST00000201845 579 ntBASIC20.59■□□□□ 0.89
Hmgcs2P54869 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.59■□□□□ 0.89
Hmgcs2P54869 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.59■□□□□ 0.89
Hmgcs2P54869 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Hmgcs2P54869 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs2P54869 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.58■□□□□ 0.89
Hmgcs2P54869 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs2P54869 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs2P54869 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs2P54869 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Hmgcs2P54869 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms