Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx3P50481 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lhx3P50481 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx3P50481 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx3P50481 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx3P50481 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lhx3P50481 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lhx3P50481 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.78■□□□□ 0.6
Lhx3P50481 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.78■□□□□ 0.6
Lhx3P50481 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.78■□□□□ 0.6
Lhx3P50481 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.78■□□□□ 0.6
Lhx3P50481 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lhx3P50481 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lhx3P50481 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lhx3P50481 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 Gm12527-201ENSMUST00000117967 564 ntBASIC18.77■□□□□ 0.6
Lhx3P50481 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.77■□□□□ 0.6
Lhx3P50481 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.77■□□□□ 0.6
Lhx3P50481 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lhx3P50481 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Lhx3P50481 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lhx3P50481 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lhx3P50481 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx3P50481 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx3P50481 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx3P50481 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.76■□□□□ 0.59
Lhx3P50481 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.76■□□□□ 0.59
Lhx3P50481 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.76■□□□□ 0.59
Lhx3P50481 Gm20049-201ENSMUST00000219950 730 ntBASIC18.76■□□□□ 0.59
Lhx3P50481 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lhx3P50481 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lhx3P50481 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Lhx3P50481 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.75■□□□□ 0.59
Lhx3P50481 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.75■□□□□ 0.59
Lhx3P50481 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lhx3P50481 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx3P50481 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.74■□□□□ 0.59
Lhx3P50481 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx3P50481 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx3P50481 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Lhx3P50481 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx3P50481 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Lhx3P50481 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.74■□□□□ 0.59
Lhx3P50481 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lhx3P50481 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.74■□□□□ 0.59
Lhx3P50481 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.74■□□□□ 0.59
Lhx3P50481 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx3P50481 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx3P50481 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Lhx3P50481 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lhx3P50481 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Lhx3P50481 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
Lhx3P50481 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.73■□□□□ 0.59
Lhx3P50481 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.73■□□□□ 0.59
Lhx3P50481 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lhx3P50481 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx3P50481 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx3P50481 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx3P50481 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx3P50481 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.72■□□□□ 0.59
Lhx3P50481 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Lhx3P50481 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Lhx3P50481 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lhx3P50481 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lhx3P50481 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms