Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Sdc2P43407 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.72■□□□□ 0.91
Sdc2P43407 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Sdc2P43407 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Sdc2P43407 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.71■□□□□ 0.91
Sdc2P43407 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.71■□□□□ 0.91
Sdc2P43407 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Sdc2P43407 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Sdc2P43407 Rarb-207ENSMUST00000225921 2756 ntBASIC20.7■□□□□ 0.9
Sdc2P43407 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc2P43407 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc2P43407 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.7■□□□□ 0.9
Sdc2P43407 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc2P43407 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.7■□□□□ 0.9
Sdc2P43407 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Sdc2P43407 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.7■□□□□ 0.9
Sdc2P43407 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc2P43407 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Sdc2P43407 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC20.69■□□□□ 0.9
Sdc2P43407 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Sdc2P43407 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.69■□□□□ 0.9
Sdc2P43407 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sdc2P43407 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc2P43407 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc2P43407 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc2P43407 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sdc2P43407 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.68■□□□□ 0.9
Sdc2P43407 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.68■□□□□ 0.9
Sdc2P43407 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sdc2P43407 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc2P43407 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc2P43407 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.68■□□□□ 0.9
Sdc2P43407 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Sdc2P43407 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Sdc2P43407 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Sdc2P43407 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20.67■□□□□ 0.9
Sdc2P43407 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Sdc2P43407 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.67■□□□□ 0.9
Sdc2P43407 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Sdc2P43407 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Sdc2P43407 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sdc2P43407 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sdc2P43407 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.66■□□□□ 0.9
Sdc2P43407 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.66■□□□□ 0.9
Sdc2P43407 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Gm9988-201ENSMUST00000069786 435 ntBASIC20.66■□□□□ 0.9
Sdc2P43407 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.66■□□□□ 0.9
Sdc2P43407 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sdc2P43407 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Sdc2P43407 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sdc2P43407 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sdc2P43407 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms