Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Smim1P0C8K7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Gm16437-201ENSMUST00000025669 507 ntBASIC12.75□□□□□ -0.37
Smim1P0C8K7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Smim1P0C8K7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Smim1P0C8K7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smim1P0C8K7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC12.73□□□□□ -0.37
Smim1P0C8K7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.73□□□□□ -0.37
Smim1P0C8K7 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.73□□□□□ -0.37
Smim1P0C8K7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Smim1P0C8K7 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Scarna2-201ENSMUST00000157560 414 ntBASIC12.72□□□□□ -0.37
Smim1P0C8K7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Gm43592-201ENSMUST00000196922 1165 ntBASIC12.72□□□□□ -0.37
Smim1P0C8K7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Smim1P0C8K7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Smim1P0C8K7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.72□□□□□ -0.37
Smim1P0C8K7 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Dancr-204ENSMUST00000132389 2347 ntBASIC12.71□□□□□ -0.37
Smim1P0C8K7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Smim1P0C8K7 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms