Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Gm42545-201ENSMUST00000202755 922 ntBASIC19.84■□□□□ 0.77
Hoxc8P09025 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.84■□□□□ 0.77
Hoxc8P09025 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc8P09025 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc8P09025 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc8P09025 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hoxc8P09025 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.84■□□□□ 0.77
Hoxc8P09025 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.83■□□□□ 0.77
Hoxc8P09025 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Hoxc8P09025 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Hoxc8P09025 Mir6349-201ENSMUST00000184059 97 ntBASIC19.83■□□□□ 0.77
Hoxc8P09025 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.83■□□□□ 0.77
Hoxc8P09025 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 Gm9987-201ENSMUST00000069768 567 ntBASIC19.83■□□□□ 0.77
Hoxc8P09025 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Hoxc8P09025 Gm5417-201ENSMUST00000079706 384 ntBASIC19.83■□□□□ 0.77
Hoxc8P09025 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hoxc8P09025 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.83■□□□□ 0.76
Hoxc8P09025 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc8P09025 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hoxc8P09025 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Hoxc8P09025 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.83■□□□□ 0.76
Hoxc8P09025 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc8P09025 Gm6433-201ENSMUST00000118634 875 ntBASIC19.82■□□□□ 0.76
Hoxc8P09025 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hoxc8P09025 Gm43799-201ENSMUST00000201845 579 ntBASIC19.82■□□□□ 0.76
Hoxc8P09025 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.82■□□□□ 0.76
Hoxc8P09025 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.82■□□□□ 0.76
Hoxc8P09025 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc8P09025 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc8P09025 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc8P09025 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc8P09025 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hoxc8P09025 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hoxc8P09025 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hoxc8P09025 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hoxc8P09025 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hoxc8P09025 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Hoxc8P09025 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Hoxc8P09025 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.8■□□□□ 0.76
Hoxc8P09025 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.8■□□□□ 0.76
Hoxc8P09025 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc8P09025 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.8■□□□□ 0.76
Hoxc8P09025 Odf3b-204ENSMUST00000227834 930 ntBASIC19.8■□□□□ 0.76
Hoxc8P09025 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc8P09025 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc8P09025 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc8P09025 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Hoxc8P09025 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hoxc8P09025 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.79■□□□□ 0.76
Hoxc8P09025 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.79■□□□□ 0.76
Hoxc8P09025 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.79■□□□□ 0.76
Hoxc8P09025 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.79■□□□□ 0.76
Hoxc8P09025 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hoxc8P09025 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Hoxc8P09025 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Gm10231-201ENSMUST00000181584 441 ntBASIC19.78■□□□□ 0.76
Hoxc8P09025 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Gm10175-202ENSMUST00000208752 441 ntBASIC19.78■□□□□ 0.76
Hoxc8P09025 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.78■□□□□ 0.76
Hoxc8P09025 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.78■□□□□ 0.76
Hoxc8P09025 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hoxc8P09025 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Hoxc8P09025 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc8P09025 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc8P09025 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.77■□□□□ 0.76
Hoxc8P09025 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc8P09025 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc8P09025 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc8P09025 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Hoxc8P09025 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Hoxc8P09025 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc8P09025 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.76■□□□□ 0.75
Hoxc8P09025 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Hoxc8P09025 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms