Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P06320 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06320 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06320 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
P06320 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P06320 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06320 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06320 Gm37352-201ENSMUST00000193908 2181 ntBASIC11.71□□□□□ -0.53
P06320 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
P06320 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
P06320 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
P06320 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.71□□□□□ -0.53
P06320 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC11.71□□□□□ -0.53
P06320 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC11.71□□□□□ -0.53
P06320 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC11.71□□□□□ -0.53
P06320 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC11.71□□□□□ -0.54
P06320 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06320 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06320 Dmtn-210ENSMUST00000228824 2377 ntBASIC11.71□□□□□ -0.54
P06320 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
P06320 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06320 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06320 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC11.71□□□□□ -0.54
P06320 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06320 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06320 Fst-202ENSMUST00000223640 2612 ntBASIC11.71□□□□□ -0.54
P06320 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
P06320 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P06320 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
P06320 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Etf1-202ENSMUST00000180351 108 ntBASIC11.7□□□□□ -0.54
P06320 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P06320 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P06320 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P06320 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC11.69□□□□□ -0.54
P06320 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Mir6538-201ENSMUST00000183713 110 ntBASIC11.69□□□□□ -0.54
P06320 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC11.69□□□□□ -0.54
P06320 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC11.69□□□□□ -0.54
P06320 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P06320 Gm10232-201ENSMUST00000089221 720 ntBASIC11.69□□□□□ -0.54
P06320 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
P06320 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
P06320 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.69□□□□□ -0.54
P06320 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P06320 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P06320 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC11.68□□□□□ -0.54
P06320 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC11.68□□□□□ -0.54
P06320 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC11.68□□□□□ -0.54
P06320 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC11.68□□□□□ -0.54
P06320 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
P06320 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Gm43702-201ENSMUST00000198772 2546 ntBASIC11.68□□□□□ -0.54
P06320 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P06320 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P06320 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms