Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Cd74P04441 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cd74P04441 Fst-202ENSMUST00000223640 2612 ntBASIC15.47■□□□□ 0.07
Cd74P04441 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cd74P04441 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.46■□□□□ 0.07
Cd74P04441 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Cd74P04441 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.46■□□□□ 0.07
Cd74P04441 Gm7514-201ENSMUST00000209475 934 ntBASIC15.46■□□□□ 0.07
Cd74P04441 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cd74P04441 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cd74P04441 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cd74P04441 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cd74P04441 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cd74P04441 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Cd74P04441 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Cd74P04441 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.45■□□□□ 0.06
Cd74P04441 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Cd74P04441 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cd74P04441 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
Cd74P04441 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd74P04441 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd74P04441 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC15.44■□□□□ 0.06
Cd74P04441 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC15.44■□□□□ 0.06
Cd74P04441 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.44■□□□□ 0.06
Cd74P04441 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd74P04441 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd74P04441 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd74P04441 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cd74P04441 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.43■□□□□ 0.06
Cd74P04441 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Cd74P04441 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 AA386476-201ENSMUST00000098781 1665 ntBASIC15.43■□□□□ 0.06
Cd74P04441 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cd74P04441 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.43■□□□□ 0.06
Cd74P04441 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC15.43■□□□□ 0.06
Cd74P04441 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
Cd74P04441 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.42■□□□□ 0.06
Cd74P04441 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.42■□□□□ 0.06
Cd74P04441 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cd74P04441 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Cd74P04441 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.41■□□□□ 0.06
Cd74P04441 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Cd74P04441 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC15.41■□□□□ 0.06
Cd74P04441 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cd74P04441 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cd74P04441 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms