Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04224 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
P04224 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
P04224 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.19■□□□□ 0.18
P04224 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Gm5812-201ENSMUST00000061073 957 ntBASIC16.19■□□□□ 0.18
P04224 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
P04224 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
P04224 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04224 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.19■□□□□ 0.18
P04224 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.18■□□□□ 0.18
P04224 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.18■□□□□ 0.18
P04224 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.18■□□□□ 0.18
P04224 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC16.18■□□□□ 0.18
P04224 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC16.18■□□□□ 0.18
P04224 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04224 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P04224 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
P04224 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.17■□□□□ 0.18
P04224 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.17■□□□□ 0.18
P04224 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
P04224 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
P04224 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04224 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.16■□□□□ 0.18
P04224 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.16■□□□□ 0.18
P04224 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P04224 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.16■□□□□ 0.18
P04224 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
P04224 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
P04224 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.16■□□□□ 0.18
P04224 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.16■□□□□ 0.18
P04224 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04224 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
P04224 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Gm22238-201ENSMUST00000175222 88 ntBASIC16.15■□□□□ 0.18
P04224 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.15■□□□□ 0.18
P04224 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
P04224 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
P04224 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04224 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
P04224 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms