Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Hbb-b1P02088 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hbb-b1P02088 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hbb-b1P02088 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hbb-b1P02088 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Hbb-b1P02088 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hbb-b1P02088 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
Hbb-b1P02088 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hbb-b1P02088 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hbb-b1P02088 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Hbb-b1P02088 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Gm11599-201ENSMUST00000118720 878 ntBASIC13.08□□□□□ -0.32
Hbb-b1P02088 AC151971.4-201ENSMUST00000214717 704 ntBASIC13.08□□□□□ -0.32
Hbb-b1P02088 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Gm37194-201ENSMUST00000193092 3031 ntBASIC13.08□□□□□ -0.32
Hbb-b1P02088 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Hbb-b1P02088 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Hbb-b1P02088 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Hbb-b1P02088 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Hbb-b1P02088 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.04□□□□□ -0.32
Hbb-b1P02088 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.04□□□□□ -0.32
Hbb-b1P02088 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hbb-b1P02088 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms