Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01852 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01852 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01852 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
P01852 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.84■□□□□ 0.29
P01852 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
P01852 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
P01852 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Gm29257-201ENSMUST00000186115 639 ntBASIC16.83■□□□□ 0.28
P01852 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.83■□□□□ 0.28
P01852 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01852 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
P01852 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
P01852 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.82■□□□□ 0.28
P01852 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
P01852 Gm6211-202ENSMUST00000167849 925 ntBASIC16.82■□□□□ 0.28
P01852 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
P01852 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.82■□□□□ 0.28
P01852 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01852 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
P01852 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.81■□□□□ 0.28
P01852 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01852 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
P01852 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
P01852 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
P01852 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
P01852 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P01852 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.8■□□□□ 0.28
P01852 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.8■□□□□ 0.28
P01852 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01852 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
P01852 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.8■□□□□ 0.28
P01852 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.79■□□□□ 0.28
P01852 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
P01852 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.79■□□□□ 0.28
P01852 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
P01852 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01852 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.79■□□□□ 0.28
P01852 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
P01852 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
P01852 Gm13148-201ENSMUST00000118892 745 ntBASIC16.78■□□□□ 0.28
P01852 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01852 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms