Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.65■□□□□ 0.26
Abcd4O89016 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.65■□□□□ 0.26
Abcd4O89016 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.65■□□□□ 0.26
Abcd4O89016 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abcd4O89016 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Abcd4O89016 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Abcd4O89016 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Abcd4O89016 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.64■□□□□ 0.25
Abcd4O89016 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Abcd4O89016 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.64■□□□□ 0.25
Abcd4O89016 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.64■□□□□ 0.25
Abcd4O89016 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abcd4O89016 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Abcd4O89016 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Abcd4O89016 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.63■□□□□ 0.25
Abcd4O89016 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC16.63■□□□□ 0.25
Abcd4O89016 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Abcd4O89016 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.63■□□□□ 0.25
Abcd4O89016 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abcd4O89016 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Abcd4O89016 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcd4O89016 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcd4O89016 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.62■□□□□ 0.25
Abcd4O89016 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Abcd4O89016 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.62■□□□□ 0.25
Abcd4O89016 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcd4O89016 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcd4O89016 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Abcd4O89016 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Abcd4O89016 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Abcd4O89016 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.61■□□□□ 0.25
Abcd4O89016 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Abcd4O89016 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.61■□□□□ 0.25
Abcd4O89016 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.61■□□□□ 0.25
Abcd4O89016 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Abcd4O89016 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Abcd4O89016 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Abcd4O89016 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Abcd4O89016 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
Abcd4O89016 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Abcd4O89016 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Abcd4O89016 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.6■□□□□ 0.25
Abcd4O89016 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Abcd4O89016 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcd4O89016 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.59■□□□□ 0.25
Abcd4O89016 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abcd4O89016 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcd4O89016 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcd4O89016 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.59■□□□□ 0.25
Abcd4O89016 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Abcd4O89016 Gm8520-201ENSMUST00000186517 868 ntBASIC16.59■□□□□ 0.25
Abcd4O89016 Gm26524-201ENSMUST00000192339 390 ntBASIC16.59■□□□□ 0.25
Abcd4O89016 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Abcd4O89016 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms