Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Becn1O88597 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Becn1O88597 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Becn1O88597 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Becn1O88597 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Becn1O88597 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Becn1O88597 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Becn1O88597 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Becn1O88597 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.09■□□□□ 0.97
Becn1O88597 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.09■□□□□ 0.97
Becn1O88597 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.09■□□□□ 0.97
Becn1O88597 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Becn1O88597 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Becn1O88597 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Becn1O88597 Gm45244-201ENSMUST00000211328 2200 ntBASIC21.08■□□□□ 0.97
Becn1O88597 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Becn1O88597 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.08■□□□□ 0.97
Becn1O88597 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.08■□□□□ 0.97
Becn1O88597 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Becn1O88597 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Becn1O88597 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Becn1O88597 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Becn1O88597 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Becn1O88597 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Becn1O88597 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Becn1O88597 Mir6236-201ENSMUST00000184437 123 ntBASIC21.07■□□□□ 0.96
Becn1O88597 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Becn1O88597 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Becn1O88597 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.07■□□□□ 0.96
Becn1O88597 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Becn1O88597 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Becn1O88597 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Becn1O88597 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC21.06■□□□□ 0.96
Becn1O88597 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Becn1O88597 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Becn1O88597 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Becn1O88597 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Becn1O88597 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
Becn1O88597 Gm21956-201ENSMUST00000179946 522 ntBASIC21.05■□□□□ 0.96
Becn1O88597 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.05■□□□□ 0.96
Becn1O88597 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Becn1O88597 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Becn1O88597 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Becn1O88597 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Becn1O88597 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Becn1O88597 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Becn1O88597 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Becn1O88597 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Becn1O88597 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.03■□□□□ 0.96
Becn1O88597 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Becn1O88597 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Becn1O88597 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.03■□□□□ 0.96
Becn1O88597 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.03■□□□□ 0.96
Becn1O88597 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Becn1O88597 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.03■□□□□ 0.96
Becn1O88597 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Becn1O88597 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Becn1O88597 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Becn1O88597 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms