Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cacna1hO88427 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Cacna1hO88427 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.06■□□□□ 0.48
Cacna1hO88427 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cacna1hO88427 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cacna1hO88427 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.05■□□□□ 0.48
Cacna1hO88427 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Cacna1hO88427 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.05■□□□□ 0.48
Cacna1hO88427 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.05■□□□□ 0.48
Cacna1hO88427 Gm38027-201ENSMUST00000192315 235 ntBASIC18.05■□□□□ 0.48
Cacna1hO88427 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cacna1hO88427 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cacna1hO88427 Gm24589-201ENSMUST00000116692 94 ntBASIC18.04■□□□□ 0.48
Cacna1hO88427 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC18.04■□□□□ 0.48
Cacna1hO88427 Mir5130-201ENSMUST00000175160 84 ntBASIC18.04■□□□□ 0.48
Cacna1hO88427 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.04■□□□□ 0.48
Cacna1hO88427 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.04■□□□□ 0.48
Cacna1hO88427 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.04■□□□□ 0.48
Cacna1hO88427 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.04■□□□□ 0.48
Cacna1hO88427 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.04■□□□□ 0.48
Cacna1hO88427 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cacna1hO88427 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1hO88427 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1hO88427 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1hO88427 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cacna1hO88427 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1hO88427 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.03■□□□□ 0.48
Cacna1hO88427 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1hO88427 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1hO88427 Gm6623-201ENSMUST00000173570 544 ntBASIC18.03■□□□□ 0.48
Cacna1hO88427 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.03■□□□□ 0.48
Cacna1hO88427 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cacna1hO88427 Gm34391-201ENSMUST00000203706 907 ntBASIC18.03■□□□□ 0.48
Cacna1hO88427 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.03■□□□□ 0.48
Cacna1hO88427 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC18.02■□□□□ 0.48
Cacna1hO88427 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cacna1hO88427 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.02■□□□□ 0.48
Cacna1hO88427 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC18.02■□□□□ 0.48
Cacna1hO88427 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.02■□□□□ 0.48
Cacna1hO88427 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.02■□□□□ 0.48
Cacna1hO88427 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cacna1hO88427 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.02■□□□□ 0.48
Cacna1hO88427 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.02■□□□□ 0.48
Cacna1hO88427 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Cacna1hO88427 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Cacna1hO88427 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Cacna1hO88427 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Cacna1hO88427 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Cacna1hO88427 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.47
Cacna1hO88427 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cacna1hO88427 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cacna1hO88427 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC18.01■□□□□ 0.47
Cacna1hO88427 Mir3081-201ENSMUST00000175305 84 ntBASIC18.01■□□□□ 0.47
Cacna1hO88427 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.01■□□□□ 0.47
Cacna1hO88427 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.01■□□□□ 0.47
Cacna1hO88427 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Cacna1hO88427 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.01■□□□□ 0.47
Cacna1hO88427 Gm21559-201ENSMUST00000220638 855 ntBASIC18.01■□□□□ 0.47
Cacna1hO88427 Gm8587-201ENSMUST00000076538 843 ntBASIC18.01■□□□□ 0.47
Cacna1hO88427 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cacna1hO88427 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1hO88427 Gm37035-201ENSMUST00000194809 2148 ntBASIC18■□□□□ 0.47
Cacna1hO88427 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cacna1hO88427 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cacna1hO88427 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms