Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.43■□□□□ 0.38
Abca4O35600 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.43■□□□□ 0.38
Abca4O35600 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Gm8587-201ENSMUST00000076538 843 ntBASIC17.43■□□□□ 0.38
Abca4O35600 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Abca4O35600 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abca4O35600 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.42■□□□□ 0.38
Abca4O35600 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Abca4O35600 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abca4O35600 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Abca4O35600 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.41■□□□□ 0.38
Abca4O35600 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.41■□□□□ 0.38
Abca4O35600 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.41■□□□□ 0.38
Abca4O35600 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.41■□□□□ 0.38
Abca4O35600 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.41■□□□□ 0.38
Abca4O35600 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Abca4O35600 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Abca4O35600 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Abca4O35600 Mir5130-201ENSMUST00000175160 84 ntBASIC17.41■□□□□ 0.38
Abca4O35600 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.41■□□□□ 0.38
Abca4O35600 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Abca4O35600 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Abca4O35600 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.4■□□□□ 0.38
Abca4O35600 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Abca4O35600 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.39■□□□□ 0.38
Abca4O35600 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Abca4O35600 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abca4O35600 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abca4O35600 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abca4O35600 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abca4O35600 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Abca4O35600 Gm17808-201ENSMUST00000200859 894 ntBASIC17.39■□□□□ 0.37
Abca4O35600 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.39■□□□□ 0.37
Abca4O35600 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Abca4O35600 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Abca4O35600 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Abca4O35600 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Abca4O35600 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.38■□□□□ 0.37
Abca4O35600 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.38■□□□□ 0.37
Abca4O35600 Mir8098-201ENSMUST00000184011 137 ntBASIC17.38■□□□□ 0.37
Abca4O35600 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Abca4O35600 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Abca4O35600 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Abca4O35600 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Mir6349-201ENSMUST00000184059 97 ntBASIC17.37■□□□□ 0.37
Abca4O35600 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.37■□□□□ 0.37
Abca4O35600 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Mir3081-201ENSMUST00000175305 84 ntBASIC17.37■□□□□ 0.37
Abca4O35600 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.37■□□□□ 0.37
Abca4O35600 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Abca4O35600 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.37■□□□□ 0.37
Abca4O35600 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Abca4O35600 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.37■□□□□ 0.37
Abca4O35600 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms