Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Clcn6O35454 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.45■□□□□ 0.7
Clcn6O35454 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.45■□□□□ 0.7
Clcn6O35454 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Clcn6O35454 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Clcn6O35454 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Clcn6O35454 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Clcn6O35454 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Clcn6O35454 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn6O35454 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Clcn6O35454 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn6O35454 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn6O35454 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn6O35454 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Clcn6O35454 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn6O35454 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn6O35454 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn6O35454 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn6O35454 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Clcn6O35454 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.43■□□□□ 0.7
Clcn6O35454 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clcn6O35454 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.43■□□□□ 0.7
Clcn6O35454 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.43■□□□□ 0.7
Clcn6O35454 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Gm6139-201ENSMUST00000079261 882 ntBASIC19.43■□□□□ 0.7
Clcn6O35454 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Clcn6O35454 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.43■□□□□ 0.7
Clcn6O35454 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.43■□□□□ 0.7
Clcn6O35454 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Clcn6O35454 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Gm37744-201ENSMUST00000194616 1590 ntBASIC19.42■□□□□ 0.7
Clcn6O35454 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.42■□□□□ 0.7
Clcn6O35454 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.42■□□□□ 0.7
Clcn6O35454 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Clcn6O35454 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC19.42■□□□□ 0.7
Clcn6O35454 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Clcn6O35454 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Clcn6O35454 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.41■□□□□ 0.7
Clcn6O35454 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.41■□□□□ 0.7
Clcn6O35454 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 CT025561.1-201ENSMUST00000214972 674 ntBASIC19.41■□□□□ 0.7
Clcn6O35454 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Clcn6O35454 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Clcn6O35454 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.41■□□□□ 0.7
Clcn6O35454 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Clcn6O35454 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
Clcn6O35454 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Clcn6O35454 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Clcn6O35454 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms