Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.45■□□□□ 0.22
Alx4O35137 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.45■□□□□ 0.22
Alx4O35137 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Alx4O35137 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Alx4O35137 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.44■□□□□ 0.22
Alx4O35137 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Alx4O35137 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Alx4O35137 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.43■□□□□ 0.22
Alx4O35137 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Alx4O35137 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.43■□□□□ 0.22
Alx4O35137 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx4O35137 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx4O35137 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx4O35137 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.43■□□□□ 0.22
Alx4O35137 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Alx4O35137 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.43■□□□□ 0.22
Alx4O35137 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Alx4O35137 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx4O35137 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.43■□□□□ 0.22
Alx4O35137 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Alx4O35137 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.42■□□□□ 0.22
Alx4O35137 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Alx4O35137 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.42■□□□□ 0.22
Alx4O35137 Gm8969-201ENSMUST00000199694 526 ntBASIC16.42■□□□□ 0.22
Alx4O35137 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Alx4O35137 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.42■□□□□ 0.22
Alx4O35137 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Alx4O35137 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Alx4O35137 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Alx4O35137 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.41■□□□□ 0.22
Alx4O35137 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.41■□□□□ 0.22
Alx4O35137 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Alx4O35137 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.41■□□□□ 0.22
Alx4O35137 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Alx4O35137 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.4■□□□□ 0.22
Alx4O35137 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Alx4O35137 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.4■□□□□ 0.22
Alx4O35137 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Alx4O35137 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Alx4O35137 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Alx4O35137 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx4O35137 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx4O35137 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Alx4O35137 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Alx4O35137 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Alx4O35137 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Alx4O35137 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
Alx4O35137 Mir7075-201ENSMUST00000184187 82 ntBASIC16.39■□□□□ 0.21
Alx4O35137 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Alx4O35137 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms