Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6F6VAN0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6F6VAN0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Atf6F6VAN0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6F6VAN0 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.95■□□□□ 0.62
Atf6F6VAN0 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Gm42642-201ENSMUST00000200683 355 ntBASIC18.95■□□□□ 0.62
Atf6F6VAN0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.95■□□□□ 0.62
Atf6F6VAN0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.95■□□□□ 0.62
Atf6F6VAN0 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Atf6F6VAN0 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Atf6F6VAN0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Atf6F6VAN0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.93■□□□□ 0.62
Atf6F6VAN0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Atf6F6VAN0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Nespas-201ENSMUST00000143738 1083 ntBASIC18.91■□□□□ 0.62
Atf6F6VAN0 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.91■□□□□ 0.62
Atf6F6VAN0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Atf6F6VAN0 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Gm18284-201ENSMUST00000172604 624 ntBASIC18.9■□□□□ 0.62
Atf6F6VAN0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Gm6420-201ENSMUST00000193885 723 ntBASIC18.9■□□□□ 0.62
Atf6F6VAN0 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Gm7514-201ENSMUST00000209475 934 ntBASIC18.9■□□□□ 0.62
Atf6F6VAN0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Atf6F6VAN0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Atf6F6VAN0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Atf6F6VAN0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6F6VAN0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6F6VAN0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6F6VAN0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.89■□□□□ 0.61
Atf6F6VAN0 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6F6VAN0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atf6F6VAN0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Atf6F6VAN0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Atf6F6VAN0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Atf6F6VAN0 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atf6F6VAN0 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms