Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
R3hdm1E9Q9Q2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.36■□□□□ 0.85
R3hdm1E9Q9Q2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
R3hdm1E9Q9Q2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
R3hdm1E9Q9Q2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
R3hdm1E9Q9Q2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Gm27032-201ENSMUST00000183124 1116 ntBASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
R3hdm1E9Q9Q2 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.33■□□□□ 0.84
R3hdm1E9Q9Q2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
R3hdm1E9Q9Q2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
R3hdm1E9Q9Q2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
R3hdm1E9Q9Q2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
R3hdm1E9Q9Q2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Gm2399-201ENSMUST00000104944 225 ntBASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
R3hdm1E9Q9Q2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Gm44549-201ENSMUST00000208351 577 ntBASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Gm10819-201ENSMUST00000099988 561 ntBASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3hdm1E9Q9Q2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Gm10231-201ENSMUST00000181584 441 ntBASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Gm10175-202ENSMUST00000208752 441 ntBASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.3■□□□□ 0.84
R3hdm1E9Q9Q2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3hdm1E9Q9Q2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3hdm1E9Q9Q2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
R3hdm1E9Q9Q2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms