Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clip3B9EHT4 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.78■□□□□ 0.44
Clip3B9EHT4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.78■□□□□ 0.44
Clip3B9EHT4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clip3B9EHT4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clip3B9EHT4 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip3B9EHT4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip3B9EHT4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clip3B9EHT4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip3B9EHT4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.77■□□□□ 0.44
Clip3B9EHT4 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
Clip3B9EHT4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Clip3B9EHT4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clip3B9EHT4 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clip3B9EHT4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Clip3B9EHT4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Clip3B9EHT4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clip3B9EHT4 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Clip3B9EHT4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Clip3B9EHT4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.76■□□□□ 0.43
Clip3B9EHT4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Gm5408-201ENSMUST00000197998 747 ntBASIC17.76■□□□□ 0.43
Clip3B9EHT4 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.76■□□□□ 0.43
Clip3B9EHT4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Gm7290-201ENSMUST00000104990 617 ntBASIC17.75■□□□□ 0.43
Clip3B9EHT4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Gm12918-201ENSMUST00000120234 636 ntBASIC17.75■□□□□ 0.43
Clip3B9EHT4 Gm15710-201ENSMUST00000121821 636 ntBASIC17.75■□□□□ 0.43
Clip3B9EHT4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Gm5075-201ENSMUST00000196916 622 ntBASIC17.75■□□□□ 0.43
Clip3B9EHT4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.75■□□□□ 0.43
Clip3B9EHT4 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.75■□□□□ 0.43
Clip3B9EHT4 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.75■□□□□ 0.43
Clip3B9EHT4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.75■□□□□ 0.43
Clip3B9EHT4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Gm27011-201ENSMUST00000182352 972 ntBASIC17.74■□□□□ 0.43
Clip3B9EHT4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clip3B9EHT4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms